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r827: an alt hit as good as a pri hit as supp

This commit is contained in:
Heng Li 2014-09-15 16:07:51 -04:00
parent bd85af08ab
commit b07587f806
2 changed files with 2 additions and 2 deletions
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2
bwamem.c
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@ -378,7 +378,7 @@ KSORT_INIT(mem_ars2, mem_alnreg_t, alnreg_slt2)
#define alnreg_slt(a, b) ((a).score > (b).score || ((a).score == (b).score && ((a).rb < (b).rb || ((a).rb == (b).rb && (a).qb < (b).qb))))
KSORT_INIT(mem_ars, mem_alnreg_t, alnreg_slt)
#define alnreg_hlt(a, b) ((a).score > (b).score || ((a).score == (b).score && (a).hash < (b).hash))
#define alnreg_hlt(a, b) ((a).score > (b).score || ((a).score == (b).score && ((a).is_alt < (b).is_alt || ((a).is_alt == (b).is_alt && (a).hash < (b).hash))))
KSORT_INIT(mem_ars_hash, mem_alnreg_t, alnreg_hlt)
#define alnreg_hlt2(a, b) ((a).is_alt < (b).is_alt || ((a).is_alt == (b).is_alt && ((a).score > (b).score || ((a).score == (b).score && (a).hash < (b).hash))))

2
main.c
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@ -4,7 +4,7 @@
#include "utils.h"
#ifndef PACKAGE_VERSION
#define PACKAGE_VERSION "0.7.10-r826-dirty"
#define PACKAGE_VERSION "0.7.10-r827-dirty"
#endif
int bwa_fa2pac(int argc, char *argv[]);