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增加run.sh

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zzh 2023-08-24 14:27:12 +08:00
parent 6f90802be2
commit 79f174cc57
1 changed files with 23 additions and 0 deletions
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run.sh 100755
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time ./bwa mem -t 12 -M -R @RG\\tID:normal\\tSM:normal\\tPL:illumina\\tLB:normal\\tPG:bwa \
/home/zzh/data/reference/human_g1k_v37_decoy.fasta \
/home/zzh/data/fastq/nm1.fq \
/home/zzh/data/fastq/nm2.fq \
-o /dev/null
# time ./bwa mem -t 64 -M -R @RG\\tID:normal\\tSM:normal\\tPL:illumina\\tLB:normal\\tPG:bwa \
# /public/home/zzh/data/reference/human_g1k_v37_decoy.fasta \
# /public/home/zzh/data/fastq/ZY2003109152013000/nm1.fq \
# /public/home/zzh/data/fastq/ZY2003109152013000/nm2.fq \
# -o /dev/null
#/public/home/zzh/data/fastq/n1.fq \
#/public/home/zzh/data/fastq/n2.fq \
#/share_nas3/zyseq-release-v1.1.3/zyseq/wes/resource/reference/human_g1k_v37_decoy.fasta \
#/share_nas3/zyseq-release-v1.1.3/zyseq/data/n1.fq \
#/share_nas3/zyseq-release-v1.1.3/zyseq/data/n2.fq \
#-o reads_mapping.sam