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r754: added command msg for -h

This commit is contained in:
Heng Li 2014-05-06 16:15:14 -04:00
parent 81970e7687
commit 6ac8dd5840
2 changed files with 2 additions and 1 deletions
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1
fastmap.c
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@ -156,6 +156,7 @@ int main_mem(int argc, char *argv[])
fprintf(stderr, "\n");
fprintf(stderr, " -v INT verbose level: 1=error, 2=warning, 3=message, 4+=debugging [%d]\n", bwa_verbose);
fprintf(stderr, " -T INT minimum score to output [%d]\n", opt->T);
fprintf(stderr, " -h INT if #hits < INT, output all in the XA tag [%d]\n", opt->max_hits);
fprintf(stderr, " -a output all alignments for SE or unpaired PE\n");
fprintf(stderr, " -C append FASTA/FASTQ comment to SAM output\n");
fprintf(stderr, " -M mark shorter split hits as secondary\n\n");

2
main.c
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@ -4,7 +4,7 @@
#include "utils.h"
#ifndef PACKAGE_VERSION
#define PACKAGE_VERSION "0.7.8-r749-dirty"
#define PACKAGE_VERSION "0.7.8-r754-dirty"
#endif
int bwa_fa2pac(int argc, char *argv[]);