diff --git a/NEWS.md b/NEWS.md index 4692889..d09544e 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,32 @@ +Release 0.7.13 (23 Feburary 2016) +--------------------------------- + +This release fixes a few minor bugs in the previous version and adds a few +minor features. All BWA algorithms should produce identical output to 0.7.12 +when there are no ALT contigs. + +Detailed changes: + + * Fixed a bug in "bwa-postalt.js". The old version may produce 0.5% of wrong + bases for reads mapped to the ALT contigs. + + * Fixed a potential bug in the multithreading mode. It may occur when mapping + is much faster than file reading, which should almost never happen in + practice. + + * Changed the download URL of GRCh38. + + * Removed the read overlap mode. It is not working well. + + * Added the ropebwt2 algorithm as an alternative to index large genomes. + Ropebwt2 is slower than the "bwtsw" algorithm, but it has a permissive + license. This allows us to create an Apache2-licensed BWA (in the "Apache2" + branch) for commercial users who are concerned with GPL. + +(0.7.13: 23 Feburary 2016, r1118) + + + Release 0.7.12 (28 December 2014) ---------------------------------