diff --git a/bwtaln.c b/bwtaln.c index c5002c6..a686c92 100644 --- a/bwtaln.c +++ b/bwtaln.c @@ -162,7 +162,6 @@ void bwa_aln_core(const char *prefix, const char *fn_fa, const gap_opt_t *opt) ks = bwa_open_reads(opt->mode, fn_fa); { // load BWT - extern uint8_t nst_nt4_table[]; char *str = (char*)calloc(strlen(prefix) + 10, 1); strcpy(str, prefix); strcat(str, ".bwt"); bwt = bwt_restore_bwt(str); free(str);