112 lines
1.8 KiB
Plaintext
112 lines
1.8 KiB
Plaintext
## StringHeader
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# /home/zzh/work/ngs/FastDup/build/bin/fastdup --input /home/zzh/data/bam/normal_all.sam --output /home/zzh/data1/out.sam --metrics ./metrics.txt --num-threads 1 --create-index --index-format CSI --tag-duplicate-set-members
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## StringHeader
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# Started on: December 16, 2024 at 02:43:41 AM CST
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## METRICS
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LIBRARY UNPAIRED_READS_EXAMINED READ_PAIRS_EXAMINED SECONDARY_OR_SUPPLEMENTARY_RDS UNMAPPED_READS UNPAIRED_READ_DUPLICATES READ_PAIR_DUPLICATES READ_PAIR_OPTICAL_DUPLICATES PERCENT_DUPLICATION ESTIMATED_LIBRARY_SIZE
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normal 108919 66154888 117508 161395 67414 15058359 876584 0.227945 127582703
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## HISTOGRAM Double
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BIN CoverageMult
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1 1.010249
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2 1.611750
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3 1.969882
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4 2.183113
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5 2.310070
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6 2.385660
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7 2.430666
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8 2.457463
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9 2.473417
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10 2.482917
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11 2.488573
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12 2.491940
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13 2.493945
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14 2.495139
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15 2.495850
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16 2.496273
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17 2.496525
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18 2.496675
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19 2.496764
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20 2.496817
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21 2.496849
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22 2.496868
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23 2.496879
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24 2.496886
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25 2.496890
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26 2.496892
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27 2.496894
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28 2.496894
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29 2.496895
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30 2.496895
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31 2.496895
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32 2.496896
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33 2.496896
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42 2.496896
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45 2.496896
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100 2.496896
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