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FastDup
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更新readme

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zzh 2024-12-18 22:22:10 +08:00
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@ -59,9 +59,11 @@ make
cd FastDup
mkdir build && cd build
cmake .. -DCMAKE_BUILD_TYPE=Release
make && sudo make install
make
```
The generated binary fastdup will be in the build/bin folder.
## Usage
1. get help
@ -70,7 +72,7 @@ make && sudo make install
fastdup --help
```
2. mark duplicates on an input BAM file
2. mark duplicates on an input BAM file using 8 threads
```bash
fastdup --input in.bam --output out.bam --metrics stats.txt --num-threads 8