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FastDup
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update readme

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liyewen521 2025-04-16 14:38:43 +00:00
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README.md
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@ -42,7 +42,6 @@ Use spdlog as log tool and the default level is 'info'.
* libbz2 * libbz2
* liblzma * liblzma
* libcurl * libcurl
* OpenSSL
* libdeflate (optional) * libdeflate (optional)
## Install ## Install
@ -67,13 +66,13 @@ The generated binary fastdup will be in the build/bin folder.
## Usage ## Usage
1. get help Get help
```bash ```bash
./fastdup --help ./fastdup --help
``` ```
2. mark duplicates on an input BAM file using 8 threads Mark duplicates on an input BAM file using 8 threads
```bash ```bash
./fastdup --input in_test.bam --output out_md.bam --metrics stats.txt --num-threads 8 ./fastdup --input in_test.bam --output out_md.bam --metrics stats.txt --num-threads 8