112 lines
1.8 KiB
Plaintext
112 lines
1.8 KiB
Plaintext
|
## StringHeader
|
||
|
|
# /home/zzh/work/ngs/FastDup/build/bin/fastdup --input /home/zzh/data/bam/normal_all.sam --output /home/zzh/data1/out.sam --metrics ./metrics.txt --num-threads 1 --create-index --index-format CSI --tag-duplicate-set-members
|
||
|
|
## StringHeader
|
||
|
|
# Started on: December 16, 2024 at 02:43:41 AM CST
|
||
|
|
|
||
|
|
## METRICS
|
||
|
|
LIBRARY UNPAIRED_READS_EXAMINED READ_PAIRS_EXAMINED SECONDARY_OR_SUPPLEMENTARY_RDS UNMAPPED_READS UNPAIRED_READ_DUPLICATES READ_PAIR_DUPLICATES READ_PAIR_OPTICAL_DUPLICATES PERCENT_DUPLICATION ESTIMATED_LIBRARY_SIZE
|
||
|
|
normal 108919 66154888 117508 161395 67414 15058359 876584 0.227945 127582703
|
||
|
|
|
||
|
|
## HISTOGRAM Double
|
||
|
|
BIN CoverageMult
|
||
|
|
1 1.010249
|
||
|
|
2 1.611750
|
||
|
|
3 1.969882
|
||
|
|
4 2.183113
|
||
|
|
5 2.310070
|
||
|
|
6 2.385660
|
||
|
|
7 2.430666
|
||
|
|
8 2.457463
|
||
|
|
9 2.473417
|
||
|
|
10 2.482917
|
||
|
|
11 2.488573
|
||
|
|
12 2.491940
|
||
|
|
13 2.493945
|
||
|
|
14 2.495139
|
||
|
|
15 2.495850
|
||
|
|
16 2.496273
|
||
|
|
17 2.496525
|
||
|
|
18 2.496675
|
||
|
|
19 2.496764
|
||
|
|
20 2.496817
|
||
|
|
21 2.496849
|
||
|
|
22 2.496868
|
||
|
|
23 2.496879
|
||
|
|
24 2.496886
|
||
|
|
25 2.496890
|
||
|
|
26 2.496892
|
||
|
|
27 2.496894
|
||
|
|
28 2.496894
|
||
|
|
29 2.496895
|
||
|
|
30 2.496895
|
||
|
|
31 2.496895
|
||
|
|
32 2.496896
|
||
|
|
33 2.496896
|
||
|
|
34 2.496896
|
||
|
|
35 2.496896
|
||
|
|
36 2.496896
|
||
|
|
37 2.496896
|
||
|
|
38 2.496896
|
||
|
|
39 2.496896
|
||
|
|
40 2.496896
|
||
|
|
41 2.496896
|
||
|
|
42 2.496896
|
||
|
|
43 2.496896
|
||
|
|
44 2.496896
|
||
|
|
45 2.496896
|
||
|
|
46 2.496896
|
||
|
|
47 2.496896
|
||
|
|
48 2.496896
|
||
|
|
49 2.496896
|
||
|
|
50 2.496896
|
||
|
|
51 2.496896
|
||
|
|
52 2.496896
|
||
|
|
53 2.496896
|
||
|
|
54 2.496896
|
||
|
|
55 2.496896
|
||
|
|
56 2.496896
|
||
|
|
57 2.496896
|
||
|
|
58 2.496896
|
||
|
|
59 2.496896
|
||
|
|
60 2.496896
|
||
|
|
61 2.496896
|
||
|
|
62 2.496896
|
||
|
|
63 2.496896
|
||
|
|
64 2.496896
|
||
|
|
65 2.496896
|
||
|
|
66 2.496896
|
||
|
|
67 2.496896
|
||
|
|
68 2.496896
|
||
|
|
69 2.496896
|
||
|
|
70 2.496896
|
||
|
|
71 2.496896
|
||
|
|
72 2.496896
|
||
|
|
73 2.496896
|
||
|
|
74 2.496896
|
||
|
|
75 2.496896
|
||
|
|
76 2.496896
|
||
|
|
77 2.496896
|
||
|
|
78 2.496896
|
||
|
|
79 2.496896
|
||
|
|
80 2.496896
|
||
|
|
81 2.496896
|
||
|
|
82 2.496896
|
||
|
|
83 2.496896
|
||
|
|
84 2.496896
|
||
|
|
85 2.496896
|
||
|
|
86 2.496896
|
||
|
|
87 2.496896
|
||
|
|
88 2.496896
|
||
|
|
89 2.496896
|
||
|
|
90 2.496896
|
||
|
|
91 2.496896
|
||
|
|
92 2.496896
|
||
|
|
93 2.496896
|
||
|
|
94 2.496896
|
||
|
|
95 2.496896
|
||
|
|
96 2.496896
|
||
|
|
97 2.496896
|
||
|
|
98 2.496896
|
||
|
|
99 2.496896
|
||
|
|
100 2.496896
|