28 lines
880 B
C
28 lines
880 B
C
|
/*********************************************************************************************
|
|||
|
|
Description: data and files for debugging
|
|||
|
|
Copyright : All right reserved by .
|
|||
|
|
|
|||
|
|
Author :
|
|||
|
|
Date : 2024/04/09
|
|||
|
|
***********************************************************************************************/
|
|||
|
|
#include <stdio.h>
|
|||
|
|
|
|||
|
|
////////////////// for debug and test //////////////////////////
|
|||
|
|
|
|||
|
|
#define DEBUG_FILE_OUTPUT // gfp1-4，debug
|
|||
|
|
// #define COUNT_SEED_LENGTH // seed1，
|
|||
|
|
// #define GET_FULL_MATCH_READ // reads
|
|||
|
|
// #define COUNT_CALC_NUM // BSW
|
|||
|
|
// #define GET_DIFFERENT_EXTENSION_LENGTH // extensionquery，target，
|
|||
|
|
// #define GET_KSW_ALIGN_SEQ
|
|||
|
|
// #define DEBUG_SW_EXTEND // bswdebug
|
|||
|
|
|
|||
|
|
////////////////////////////////////////////////////////////////
|
|||
|
|
|
|||
|
|
extern FILE *gf[4], *gfq[4], *gft[4], *gfi[4];
|
|||
|
|
|
|||
|
|
int open_qti_files();
|
|||
|
|
|
|||
|
|
int open_debug_files();
|
|||
|
|
|
|||
|
|
int close_files();
|